YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUT2_STYHA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	102	0.96
Transmembrane Helix	103	122	0.69
Non-Cytoplasmic	123	130	0.60
Transmembrane Helix	131	148	0.62
Cytoplasmic	149	152	0.56
Transmembrane Helix	153	173	0.81
Non-Cytoplasmic	174	180	0.61
Transmembrane Helix	181	202	0.84
Cytoplasmic	203	209	0.51
Transmembrane Helix	210	229	0.87
Non-Cytoplasmic	230	260	0.75
Transmembrane Helix	261	283	0.87
Cytoplasmic	284	289	0.79
Transmembrane Helix	290	311	0.94
Non-Cytoplasmic	312	344	0.79
Transmembrane Helix	345	366	0.84
Cytoplasmic	367	383	0.69
Transmembrane Helix	384	405	0.69
Non-Cytoplasmic	406	417	0.46
Transmembrane Helix	418	440	0.87
Cytoplasmic	441	445	0.50
Transmembrane Helix	446	469	0.88
Non-Cytoplasmic	470	480	0.51
Transmembrane Helix	481	508	0.78
Cytoplasmic	509	662	0.59

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQRVSDQAM AEVIAETRTN SSSRRHGGGD DTPSLPYMHK VGAPPKQTLF QEIKHSFNET  60
   61 FFPDKPFGNF KDQSGSRKFV LGLQYIFPIL EWGRHYDLKK FRGDFIAGLT IASLCIPQDL 120
  121 AYAKLANLDP WYGLYSSFVA PLVYAFMGTS RDIAIGPVAV VSLLLGTLLS NEISNTKSHD 180
  181 YLRLAFTATF FAGVTQMLLG VCRLGFLIDF LSHAAIVGFM AGAAITIGLQ QLKGLLGIKD 240
  241 FTKNSDIVSV MHSVWSNVHH GWNWETILIG LSFLIFLLIT KYIAKKNKKL FWVSAISPMI 300
  301 CVIVSTFFVY ITRADKRGVT IVKHIKSGVN PSSANEIFFH GKYLGAGVRV GVVAGLVALT 360
  361 EAMAIGRTFA AMKDYSIDGN KEMVAMGTMN IVGSLTSCYV TTGSFSRSAV NYMAGCKTAV 420
  421 SNIVMAIVVL LTLLVITPLF KYTPNAVLAS IIIAAVVNLV NIEAMVLLWK IDKFDFVACM 480
  481 GAFFGVIFKS VEIGLLIAVA ISFAKILLQV TRPRTAVLGK LPGTSVYRNI QQYPKAEQIP 540
  541 GMLIIRVDSA IYFSNSNYIK ERILRWLIDE GAQRTESELP EIQHLIVEMS PVTDIDTSGI 600
  601 HAFEELYKTL QKREVQLMLA NPGPVVIEKL HASNLAELIG EDKIFLTVAD AVATYGPKTA 660
  661 AF