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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SSG1_SORBI
Protein type: Globular with Signal Peptide
Type Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLATSQLV ATHAGLGVPD ASMFRRGGVQ GLRAAARASA AAGDALSMRT SACPAPRQQP  60
   61 AARRGGRGGR FPSLVVCATA GMNVVFVGAE MAPWSKTGGL GDVLGGLPPA MAANGHRVMV 120
  121 VSPRYDQYKD AWDTSVVSEI KMGDGYETVR FFHCYKRGVD RVFIDHPLFL ERVWGKTEEK 180
  181 IYGPDAGTDY KDNQLRFSLL CQAALEAPRI LSLNNNPYFS GPYGEDVVFV CNDWHTGPLS 240
  241 CYLKSNYQSN GIYKDAKTAF CIHNISYQGR FAFSDFPELN LPERFKSSFD FIDGYEKPVE 300
  301 GRKINWMKAG ILEADRVLTV SPYYAEELIS GIARGCELDN IMRLTGITGI VNGMDVSEWD 360
  361 PSKDKYIAVK YDVSTAVEAK ALNKEALQAE VGLPVDRKIP LVAFIGRLEE QKGPDVMAAA 420
  421 IPLLMEEDIQ IVLLGTGKKK FERMLMSAEE KYPDKVRAVV KFNAALAHHI MAGADLLAVT 480
  481 SRFEPCGLIQ LQGMRYGTPC ACASTGGLVD TIIEGKTGFH MGRLSVDCNV VEPADVKKVA 540
  541 TTLKRAIKVV GTPAYEEMVK NCMIQDLSWK GPAKNWENVL LSLGVAGGEP GIEGEEIAPL 600
  601 AKENVAAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle