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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SSG1_HORVU
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALATSQLA TSGTVLGVTD RFRRPGFQGL RPRNPADAAL GMRTIGASAA PKQSRKAHRG  60
   61 SRRCLSVVVS ATGSGMNLVF VGAEMAPWSK TGGLGDVLGG LPPAMAANGH RVMVVSPRYD 120
  121 QYKDAWDTSV ISEIKVADEY ERVRFFHCYK RGVDRVFIDH PWFLEKVRGK TKEKIYGPDA 180
  181 GTDYEDNQQR FSLLCQAALE APRILNLNNN PYFSGPYGED VVFVCNDWHT GLLACYLKSN 240
  241 YQSNGIYRTA KVAFCIHNIS YQGRFSFDDF AQLNLPDRFK SSFDFIDGYD KPVEGRKINW 300
  301 MKAGILQADK VLTVSPYYAE ELISGEARGC ELDNIMRLTG ITGIVNGMDV SEWDPTKDKF 360
  361 LAVNYDITTA LEAKALNKEA LQAEVGLPVD RKVPLVAFIG RLEEQKGPDV MIAAIPEILK 420
  421 EEDVQIILLG TGKKKFEKLL KSMEEKFPGK VRAVVRFNAP LAHQMMAGAD LLAVTSRFEP 480
  481 CGLIQLQGMR YGTPCVCAST GGLVDTIVEG KTGFHMGRLS VDCNVVEPAD VKKVATTLKR 540
  541 AVKVVGTPAY QEMVKNCMIQ DLSWKGPAKN WEDVLLELGV EGSEPGIVGE EIAPLAMENV 600
  601 AAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle