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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32171673
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNAVMDAIA LLSSLASDLD IMLNDLRSAP SHAATATATA TTTATIATAT ATATTTTNRQ  60
   61 QQHHNHHNQQ QMQSRQLHAH HWQSINNNKN NNVSNNNNNN NNNNNNINNN NNNNNHSAHP 120
  121 PCLIDIKLKS SRSAATKITH TTTANQLQQQ QRRRVAPKPL PRPPRRTRPT GQKEVGPSEE 180
  181 DGDTDASDLA NMTSPLSASA AATRINGLSP EVKKVQRLPL WNARNGNGST TTHCHPTGVS 240
  241 VQRRLPIQSH QQRILNQRFH HQRMHHGTSE PIPSGVATPS SLDSASVDGG KSHTGNNNNI 300
  301 NNNHNGQQSQ KSQQQAGLAA KLNVLAQSNL NNNNTTNQPG SMTPASNRTG LDSNQNQKQN 360
  361 LNADSRRSSS VDPDADADDV VDAAHGGAFE DDMQALLPKC SRRSRDELSQ SRTSLVSSSE 420
  421 GGILAEGETS SEDDEEEPVE AEDEGEESSR DSSDNSPPCD LGLMERLLVT HPMWFLPGIQ 480
  481 RSGAVHLLQG KEEGTFIVRG SSQPNTMAVS VRLPQDTGPY IEHYLIQSHD NVLSLESSRF 540
  541 TFGSIPSLIA HYAQCCDELP VQLMLPRVLR EANNRKKLSS LALLGQEFWS YVSSPALLGP 600
  601 LTPSVAPSKD QQLLDAKSPL SLTETSGLGT ATFFSDTVSK PPPTGAPPLP GGGLFSPTGS 660
  661 GQLLGFFSQA GTPSDTTNSS LSSFTTSGGQ HMQLLSPNSV DSVILTMSPV DNPGHYLPGS 720
  721 TGAPMAPLCP SVVDQQLSTF KVAQTAPEVD QVRPQRPKPP NTLNLKPPAP PLRWSKPHSP 780
  781 DQNGSANGNF TVTTTVTFSM ENGGGGGSGP TVGNGNGKFV EVTTPAASNP FNALLNGQAS 840
  841 TFQTFAKRLS PEGECKDTLS SQGSSSNDSR WPPPARKLLT SPMTPLTPSG GSSSSGGKSR 900
  901 KSRAGKESQH YKESDILESP PMQYCASALS DKISDYEDVW SHDPSDRASL LTSFRPALDT 960
  961 VGGVMNRRPD LLAETPSTPT PTQQSHLTPC EEETTATPNE SSSQSLLQFS GDVPARSRAG1020
 1021 LLLPNLSGQV PPVAMTKSMT AAEDDGGDTT PTAEGQANGA SRSKQGSPFY AEPADALRQA1080
 1081 GLTSAATAIL RRQHRSQMLH ASQRHSEPLK AGFGGSGNGA MLQPSDLEKL AGSLDELKPK1140
 1141 PKVSQQQQQS QQQQQPTKRA RNRIDHWQLD SSWEFMAKQD TGSHAGGDYD TAAIDWQEKE1200
 1201 NSLGRDSRAD GQGKKRTLTI HQIIANRLPD LNLPELVRCS TPPQTAALQP HVLGQDKAGV1260
 1261 GCDGSQKSFQ SQIGCRLSSY DNVFCQNSFG GIDSAQSDDG TIFSEPWDSS QWDTFLPHDD1320
 1321 ATINSDTIHL SKCRPALSED DTIVEELQST KDGSNGSCNQ DTLKANRNGA GHHKLNNGNG1380
 1381 NGKANNRPKV ATILRNPSMR DREVLCHPRN KMSIQSSGPG DSLRAYTLQL AQDPSSTFAR1440
 1441 NIENFICCTK ESREAAPQVV MRNMRQFMSG MKNYLVKHGE GKFHAELETA RARLKSDEFL1500
 1501 NLDAMLETVM HQLVVLPLRE HLYGIFVDHY QRSEDIQLLA QNVRYACERE AADFGIRPTV1560
 1561 TPPSQAALRL IANLLWRLQE AELPLDKLEL FLCVISTVFD ATGCPRGQQL GADDFLPVLV1620
 1621 YVVAKCGFVG AEIEAEFMWG LLQPTLLNGE PGYYLTALCS AVQVLKTFMA SEGESGSGSL1680
 1681 DWRSSCLPAC SSVLRVIIPD ECNGSLQTRT LPVRPHTTTR EVCRIIAHKA RITNPQDYAL1740
 1741 FKLVDGEETL LTDAECPQDA RLAAKGKHCM LAYKRIDAKI AWPTAQLAGH 

YRC Informatics Platform - Version 3.0
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