YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPRC_COTJA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAWIFFLLC LAGKALAAPQ EALPDETEVI EDVTTEEPVG ANPVQVEVGE FEEPTEDVEE  60
   61 IVAENPCQNH HCKHGKVCEV DDNNSPMCVC QDPSSCPATS GVFEKVCGTD NKTYDSSCHF 120
  121 FATKCTLEGT KKGHKLHLDY IGPCKFIPPC LDTELTEFPL RMRDWLKNVL ITLYERDEDN 180
  181 NLLTEKQKLK VKKIHENEKR LEAGDHTVEL LARDFEKNYN MYIFPVHWQF GQLDQHPIDG 240
  241 YLSHTELAPL RAPLIPMEHC TTRFFEACDL DNDKYIALEE WASCFGIKEK DIDKDLVI

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	298	0.99