YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SP22_ORYSA, SPCS...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSWVQRLLT TATTAALLLL AACCAASALD AFHVPSVQAQ AHVTKINRFH KQLNGNDKVT  60
   61 LTFNLSANLE SLFTWSTKQV FVFLTAEYEN SKNSLNQVSL WDHIIPDKDK ANLQVEVKSK 120
  121 YPLIDQGSSL RGKKVQLVLH WHVMPKAGVM IRDRMALSEF NLPDSYTS

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	168	0.98