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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45645191
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.66
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFLLLTVL VIGNQSAWQE NIRPKLYVEL GPEDVLKFVG NESVVDHFKL VTKDGNSLLI  60
   61 GARNTVFNLS IHDLVEQQRL VWTSPEDDTK MCLVKGKDEE ACQNYIRIMV VPSPGRLFVC 120
  121 GTNSFRPMCN TYIISDSNYT LEATKNGQAV CPYDPRHNST SVLADNELYS GTVADFSGSD 180
  181 PIIYREPLQT EQYDSLSLNA PNFVSSFTQG DFVYFFFRET AVEFINCGKA IYSRVARVCK 240
  241 WDKGGPHRFR NRWTSFLKSR LNCSIPGDYP FYFNEIQSAS NLVEGQYGSM SSKLIYGVFN 300
  301 TPSNSIPGSA VCAFALQDIA DTFEGQFKEQ TGINSNWLPV NNAKVPDPRP GSCHNDSRAL 360
  361 PDPTLNFIKT HSLMDENVPA FFSQPILVRT STIYRFTQIA VDAQIKTPGG KTYDVIFVGT 420
  421 DHGKIIKSVN AESADSADKV TSVVIEEIDV LTKSEPIRNL EIVRTMQYDQ PKDGSYDDGK 480
  481 LIIVTDSQVV AIQLHRCHND KITSCSECVA LQDPYCAWDK IAGKCRSHGA PRWLEENYFY 540
  541 QNVATGQHAA CPSGKINSKD ANAGEQKGFR NDMDLLDSRR QSKDQEIIDN IDKNFEDIIN 600
  601 AQYTVETLVM AVLAGSIFSL LVGFFTGYFC GRRCHKDEDD NLPYPDTEYE YFEQRQNVNS 660
  661 FPSSCRIQQE PKLLPQVEEV TYAEPVLLPQ PPPPNKMHSP KNTLRKPPMH QMHQGPNSET 720
  721 LFQFQPDGYN TQQSYRGRDN FGTLRSHQVM GDNYRRGDGF STTRSVKKAV NNTNTRNRSL 780
  781 GRARRQPPRH GIVTQHRSNS PQQQQQQSQQ PHSSSGSSPV MSNSSSSPAP PSSSPSPQES 840
  841 PKNCSYIYRD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle