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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SLP1_CLOTM, SLAP...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKNKVLSI LLTLLLIIST TSVNMSFAEA TPSIEMVLDK TEVHVGDVIT ATIKVNNIRK  60
   61 LAGYQLNIKF DPEVLQPVDP ATGEEFTDKS MPVNRVLLTN SKYGPTPVAG NDIKSGIINF 120
  121 ATGYNNLTAY KSSGIDEHTG IIGEIGFKVL KKQNTSIRFE DTLSMPGAIS GTSLFDWDAE 180
  181 TITGYEVIQP DLIVVEAEPL KDASVALELD KTKVKVGDII TATIKIENMK NFAGYQLNIK 240
  241 YDPTMLEAIE LETGSAIAKR TWPVTGGTVL QSDNYGKTTA VANDVGAGII NFAEAYSNLT 300
  301 KYRETGVAEE TGIIGKIGFR VLKAGSTAIR FEDTTAMPGA IEGTYMFDWY GENIKGYSVV 360
  361 QPGEIVAEGE EPGEEPTEEP VPTETPVDPT PTVTEEPVPS ELPDSYVIME LDKTKVKVGD 420
  421 IITATIKIEN MKNFAGYQLN IKYDPTMLEA IELETGSAIA KRTWPVTGGT VLQSDNYGKT 480
  481 TAVANDVGAG IINFAEAYSN LTKYRETGVA EETGIIGKIG FRVLKAGSTA IRFEDTTAMP 540
  541 GAIEGTYMFD WYGENIKGYS VVQPGEIVAE GEEPTEEPVP TETPVDPTPT VTEEPVPSEL 600
  601 PDSYVIMELD KTKVKEGDVI IATIRVNNIK NLAGYQIGIK YDPKVLEAFN IETGDPIDEG 660
  661 TWPAVGGTIL KNRDYLPTGV AINNVSKGIL NFAAYYVYFD DYREEGKSED TGIIGNIGFR 720
  721 VLKAEDTTIR FEELESMPGS IDGTYMLDWY LNRISGYVVI QPAPIKAASD EPIPTDTPSD 780
  781 EPTPSDEPTP SDEPTPSDEP TPSDEPTPSE TPEEPIPTDT PSDEPTPSDE PTPSDEPTPS 840
  841 DEPTPSDEPT PSETPEEPIP TDTPSDEPTP SDEPTPSDEP TPSDEPTPSD EPTPSETPEE 900
  901 PIPTDTPSDE PTPSDEPTPS DEPTPSDEPT PSDEPTPSET PEEPIPTDTP SDEPTPSDEP 960
  961 TPSDEPTPSD EPTPSDEPTP SDEPTPSDEP TPSETPEEPI PTDTPSDEPT PSDEPTPSDE1020
 1021 PTPSDEPTPS DEPTPSDEPT PSDEPTPSET PEEPIPTDTP SDEPTPSDEP TPSDEPTPSD1080
 1081 EPTPSDEPTP SETPEEPIPT DTPSDEPTPS DEPTPSDEPT PSDEPTPSDE PTPSETPEEP1140
 1141 IPTDTPSDEP TPSDEPTPSD EPTPSDEPTP SDEPTPSETP EEPIPTDTPS DEPTPSDEPT1200
 1201 PSDEPTPSDE PTPSDEPTPS ETPEEPIPTD TPSDEPTPSD EPTPSDEPTP SDEPTPSDEP1260
 1261 TPSETPEEPI PTDTPSDEPT PSDEPTPSDE PTPSDEPTPS DEPTPSDEPT PSDEPTPSET1320
 1321 PEEPIPTDTP SDEPTPSDEP TPSDEPTPSD EPTPSDEPTP SDEPTPSDEP TPSETPEEPT1380
 1381 PTTTPTPTPS TTPTSGSGGS GGSGGGGGGG GGTVPTSPTP TPTSKPTSTP APTEIEEPTP1440
 1441 SDVPGAIGGE HRAYLRGYPD GSFRPERNIT RAEAAVIFAK LLGADESYGA QSASPYSDLA1500
 1501 DTHWAAWAIK FATSQGLFKG YPDGTFKPDQ NITRAEFATV VLHFLTKVKG QEIMSKLATI1560
 1561 DISNPKFDDC VGHWAQEFIE KLTSLGYISG YPDGTFKPQN YIKRSESVAL INRALERGPL1620
 1621 NGAPKLFPDV NESYWAFGDI MDGALDHSYI IEDEKEKFVK LLED

YRC Informatics Platform - Version 3.0
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