YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SLEB_OCEIH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQSYKAFMI ILVVCSSLTM YFTQTDNTKT YAFSDQVIQQ GAVGEDVIEL QARLQYLGFY  60
   61 NGKIDGVFGW GTYWALRNFQ YEFGMEIDGL AGQTTKDKLV QASNYDKEYV TEQINKGNQF 120
  121 THYGGGDRNT DGQSNSGGGS GNSGEDTGGT PSVNVPQGYS QNDIQLMANA VYGEARGEPY 180
  181 EGQVAVAAVI LNRLNSALFP DTVSGVIFEP RAFTAVADGQ IWLEPNDKAR EAVLDAINGW 240
  241 DPSGNALYYF NPDTATSGWI WTRPQIKQIG KHIFCK

Type	Start	End	Confidence
Signal Peptide	1	25	0.80
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	276	0.99