YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228819802, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKAIFKIA VLLAFIGLSL MVSSIQLKNV EAFSNQVIQR GASGEDVIEL QSRLKYNGFY  60
   61 TGKVDGVFGW GTYWALRNFQ EKFGLPVDGL AGAKTKQMLV KATKYDKSTA NKGTTTNKGN 120
  121 SGGTAQENKP PQNKGTNVPN GYSQNDIQLM ANAVYGESRG EPYLGQVAVA AVILNRVTSA 180
  181 SFPNTVSGVI FEPRAFTAVA DGQIYLTPNE TAKKAVLDAI NGWDPTGNAL YYFNPDTATS 240
  241 KWIWTRPQIK KIGKHIFCK

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	259	0.99