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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30261021, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGIVSPVAAA GKSFPDVPAG HWAEGSINYL VDKGAITGKP  60
   61 DGTYGPTESI DRASAAVIFT KILNLPVDEN AQPSFKDAKN IWSSKYIAAV EKAGVVKGDG 120
  121 KENFYPEGKI DRASFASMLV SAYNLKDKVN GELVTTFEDL LDHWGEEKAN ILINLGISVG 180
  181 TGGKWEPNKS VSRAEAAQFI ALTDKKYGKK DNAQAYVTDV KVSEPTKLTL TGTGLDKLSA 240
  241 DDVTLEGDKA VAIEASTDGT SAVVTLGGKV APNKDLTVKV KNQSFVTKFV YEVKKLAVEK 300
  301 LTFDDDRAGQ AIAFKLNDEK GNADVEYLNL ANHDVKFVAN NLDGSPANIF EGGEATSTTG 360
  361 KLAVGIKQGD YKVEVQVTKR GGLTVSNTGI ITVKNLDTPA SAIKNVVFAL DADNDGVVNY 420
  421 GSKLSGKDFA LNSQNLVVGE KASLNKLVAT IAGEDKVVDP GSISIKSSNH GIISVVNNYI 480
  481 TAEAAGEATL TIKVGDVTKD VKFKVTTDSR KLVSVKANPD KLQVVQNKTL PVTFVTTDQY 540
  541 GDPFGANTAA IKEVLPKTGV VAEGGLDVVT TDSGSIGTKT IGVTGNDVGE GTVHFQNGNG 600
  601 ATLGSLYVNV TEGNVAFKNF ELVSKVGQYG QSPDTKLDLN VSTTVEYQLS KYTSDRVYSD 660
  661 PENLEGYEVE SKNLAVADAK IVGNKVVVTG KTPGKVDIHL TKNGATAGKA TVEIVQETIA 720
  721 IKSVNFKPVQ TENFVEKKIN IGTVLELEKS NLDDIVKGIN LTKETQHKVR VVKSGAEQGK 780
  781 LYLDRNGDAV FNAGDVKLGD VTVSQTSDSA LPNFKADLYD TLTTKYTDKG TLVFKVLKDK 840
  841 DVITSEIGSQ AVHVNVLNNP NL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle