YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7766, gi\|1711...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLELLVVLL VGLAALAPSG STCCKTEPPR CETEPPRCET EPPRCETEPP RCETEPPRCE  60
   61 TTTPKCETTP PTCRTEPPTC KTEPPTCRTE PPTCKTKPPT CRTEPPTCRT EPPTCKTKPP 120
  121 TCKTEPPTCK TEPPTCRTEP PTCKTEPPTC RTEPPTCKTE PPTCKTEPPT CKTEPPCEKH 180
  181 CTKRIKRHRT KRTKRSKSTK KIVHHHNRPG TTPESGCGCG SKNESGGGGS GCILKDLLTP 240
  241 KCPDSKPKPQ ASPKCKSDPK PKAASKTTSK PKPKACDSGK KNTTKKPRKT QPQKGGC

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	297	0.99