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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAFB1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETLSGLGD SGAASAAAVS SAASETGTRR LSDLRVIDLR AELRKRNLTS SGNKSVLMER  60
   61 LKKAIEEEGG NPDEIEVISE GNKKMPKRPS KGKKPEDEGV EDNGLEENSG DGQEDVETSL 120
  121 ENLQDMDMMD ISVLDEADID NGSVADCVEE EEEATLPEGL GLLRIGRLQS KGLPEQLQEL 180
  181 AIDDKEAINN VDTSSSDFTI LQEMEEASLE PENEKILDIL GETCKSEPVK EEGSELEQPF 240
  241 AQATSSVGPD RKLAEEEDLF ESCGHPEEEE EEEEEEEQEE EQEEEGDLAL ASSSKSESSS 300
  301 TRCQWSEADA LLAVVKREPA EAPGGGTGMD REPVGLEEPV EQSSTAAQLP ETTSQELVRA 360
  361 PTAAPSPEPR DSKDDVKKFA FDACNDVPAA PKESSASEGA DQKMSSVEDD SDTKRLSREE 420
  421 KGRSSCGRNF WVSGLSSTTR ATDLKNLFSR YGKVVGAKVV TNARSPGARC YGFVTMSTAE 480
  481 EATKCINHLH KTELHGKMIS VEKAKSEPAG KRVPDRRDGD SKKEKTSTSD RSANLKREEK 540
  541 GDRKDDAKKT DDGSTEKSKD ADDQKPGPSE RSRTTKSGSR GTERTVVMDK SKGVPVISVK 600
  601 TSGSKERASK SQDRKSVSRE KRSVVSFDKV KESRKSRDSE SRRERERERS EREQRLQAQW 660
  661 EREERERLEI ARERLAFHRH RLERERMERE RLERERMHVE QERRREQERI HREREELRRQ 720
  721 QELRYEQERR PAVRRPYEVD GRRDDAYWPE AKRAALDDRY HSDFSRQDRF HDFDHRDRGR 780
  781 YPNHSVDRRE GSRSMMGDRE GQHYPERHGG PERHGRDSRD GWGYGSNKRL SEGRGLPLLP 840
  841 RRDWGEHARR LEDDRAWQGT ADGGMMERDQ QRWQGGERSM SGHSGPGHMM NRGGMSGRGS 900
  901 FAPGGASRRH VIPRGGMQAG FGGTEPGQQT Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle