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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SELO_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVRAAVGA SLAVARTRPR CVGLALPSSA PRSAWAAAME PTPRWLAGLR FDNRALRELP  60
   61 VETPPPGPED SLATPRPVPG ACFSRARPAP LRRPRLVALS EPALALLGLE ASEEAEVEAE 120
  121 AALFFSGNAL LPGTEPAAHC YCGHQFGQFA GQLGDGAAMY LGEVCTAAGE RWELQLKGAG 180
  181 PTPFSRQADG RKVLRSSIRE FLCSEAMFHL GIPTTRAGAC VTSESTVMRD VFYDGNPKYE 240
  241 KCTVVLRIAP TFIRFGSFEI FKPPDEHTGR AGPSVGRDDI RVQLLDYVIS SFYPEIQAAH 300
  301 TCDTDNIQRN AAFFREVTQR TARMVAEWQC VGFCHGVLNT DNMSIVGLTI DYGPFGFLDR 360
  361 YDPDHICNAS DNAGRYTYSK QPQVCKWNLQ KLAEALEPEL PLALAEAILK EEFDTEFQRH 420
  421 YLQKMRKKLG LIRVEKEEDG TLVAKLLETM HLTGADFTNT FCVLSSFPAD LSDSAEFLSR 480
  481 LTSQCASLEE LRLAFRPQMD PRQLSMMLML AQSNPQLFAL IGTQANVTKE LERVEHQSRL 540
  541 EQLSPSDLQR KNRDHWEAWL QEYRDRLDKE KEGVGDTAAW QAERVRVMRA NNPKYVLRNY 600
  601 IAQKAIEAAE NGDFSEVRLV LKLLESPYHS EEEATGPEAV ARSTEEQSSY SNRPPLWAAE 660
  661 LCVTCSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle