YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148660412, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDEGDVADE AVADGAENAD SRGSGGRTAL VTKPVVRPQR PTGKRSRSRA AGADADVDVE  60
   61 EPSTAASEAT GVAKDDSTTK AVSKAARAKK ASKPKARSVN PIAFVYNYLK QVVAEMRKVI 120
  121 WPNRKQMLTY TSVVLAFLAF MVALVAGADL GLTKLVMLVF G

Type	Start	End	Confidence
Cytoplasmic	1	126	0.98
Transmembrane Helix	127	148	0.93
Non-Cytoplasmic	149	161	0.84