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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STAB2_RAT
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLPSLLTRLE QMPDYSIFRG YIIHYNLASA IESADAYTVF VPNNEAIENY IREKKATSLK  60
   61 EDILRYHVVL GEKLLKNDLH NGMHRETMLG FSYLLAFFLR NDQLYVNEAP INYTNVATDK 120
  121 GVIHGLEKVL EIQKNRCDNN DTIIVRGECG KCSQQAPCPL ETKPLRETRK CIYSIYFMGK 180
  181 RSVFIGCQPQ CVRTIITRAC CAGFFGPQCQ ACPGRGQNVC SGNGFCLDGV NGTGTCQCGL 240
  241 GFNGTACETC TEGKYGIHCD QACSCVHGRC SQGPLGDGSC DCDVGWRGVK CDMEITTDNC 300
  301 NGTCHTSANC LLDPDGKASC KCAAGFRGNG TVCTAINACE TSNGGCSTKA DCKRTTPGNR 360
  361 VCVCKAGYTG DGIVCLEINP CLENHGGCDR NAECTQTGPN QAVCNCLPKY TGDGKVCSLI 420
  421 NVCLTNNGGC SPFAFCNYTE QDQRICTCKP DYTGDGIVCR GSIYGELPKN PSTSQYFFQL 480
  481 QEHAVRELAG PGPFTVFAPL SSSFNHEPRI KDWDQQGLMS QVLRYHVVGC QQLLLDNLKV 540
  541 TTSATTLQGE PVSISVSQDT VFINNEAKVL SSDIISTNGV IHVIDKLLSP KNLLITPKDA 600
  601 LGRVLQNLTT VAANHGYTKF SKLIQDSGLL SVITDSIHTP VTVFWPTDKA LEALPPEQQD 660
  661 FLFNQDNKDK LKSYLKFHVI RDSKALASDL PRSASWKTLQ GSELSVRCGT GSDIGELFLN 720
  721 EQMCRFIHRG LLFDVGVAYG IDCLLMNPTL GGRCDTFTTF DIPGECGSCI FTPKCPLKSK 780
  781 PKGVKKKCIY NPLPFRRNVE GCQNLCTVVI QTPRCCHGYF MPDCQACPGG PDTPCNNRGM 840
  841 CRDLYTPMGQ CLCHTGFNGT ACELCWHGRF GPDCQPRSCS EHGQCDEGIT GSGECLCETG 900
  901 WTAASCDTPT AVFAVCTPAC SVHATCTENN TCVCNLNYEG DGITCTVVDF CKQNNGGCAK 960
  961 VAKCSQKGTQ VSCSCKKGYK GDGYSCIEID PCADGVNGGC HEHATCRMTG PGKHKCECKS1020
 1021 HYVGDGVDCE PEQLPLDRCL QDNGQCHPDA SCADLYFQDT TVGVFHLRSP LGQYKLTFDK1080
 1081 AKEACAKEAA TIATYNQLSY AQKAKYHLCS AGWLESGRVA YPTTYASQKC GANVVGIVDY1140
 1141 GSRANKSEMW DVFCYRMKDV NCTCKAGYVG DGFSCSGNLL QVLMSFPSLT NFLTEVLAFS1200
 1201 KSSARGQAFL KHLTDLSIRG TLFVPQNSGL PGNKSLSGRD IEHHLTNVNV SFYNDLVNGT1260
 1261 FLRTMLGSQL LITFSQDQLH QETRFVDGRS ILQWDIIAAN GILHIISEPL RAPPTAATAA1320
 1321 HSGLGTGIFC AVVLVTGAIA LAAYSYFRLK QRTTGFQRFD QKRTLMSWLL ASSSPRISQT1380
 1381 LCMRPQRRHP QSPPVTPSQT LENRIWRTAT LWGHCGPDMR SQQATTVTVP R

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