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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAPA_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQVLSSLLV IAGLVSGQAI AAPESPPHAD IRDSGFVYCV SGQVNTFNPS KASSGLIVDT  60
   61 LAAQFYDRLL DVDPYTYRLM PELAESWEVL DNGATYRFHL RRDVPFQKTD WFTPTRKMNA 120
  121 DDVVFTFQRI FDRNNPWHNV NGSNFPYFDS LQFADNVKSV RKLDNHTVEF RLAQPDASFL 180
  181 WHLATHYASV MSAEYARKLE KEDRQEQLDR QPVGTGPYQL SEYRAGQFIR LQRHDDFWRG 240
  241 KPLMPQVVVD LGSGGTGRLS KLLTGECDVL AWPAASQLSI LRDDPRLRLT LRPGMNVAYL 300
  301 AFNTAKPPLN NPAVRHALAL AINNQRLMQS IYYGTAETAA SILPRASWAY DNEAKITEYN 360
  361 PAKSREQLKS LGLENLTLKL WVPTRSQAWN PSPLKTAELI QADMAQVGVK VVIVPVEGRF 420
  421 QEARLMDMSH DLTLSGWATD SNDPDSFFRP LLSCAAIHSQ TNLAHWCDPK FDSVLRKALS 480
  481 SQQLAARIEA YDEAQSILAQ ELPILPLASS LRLQAYRYDI KGLVLSPFGN ASFAGVYREK 540
  541 QDEVKKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle