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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RXRBB_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLPPSTSA VSSPVSSVDS PLSAVSSSIG SPGVPGTPSI GYGPISNSQI NSSMSVSRLH  60
   61 AVSSSDDVKP PFGLKSVSGS GPMLSQKRMC AICGDRSSGK HYGVYSCEGC KGFFKRTVRK 120
  121 DLSYTCRDNK ECLVDKRQRN RCQYCRYQKC LAMGMKREAV QEERQKNKER DGDYECSSSA 180
  181 NEEMPVEKIL EAETAVEHRT DLHSDATGSP NDPVTNICQA ADKQLFTLVE WAKRVPHFSD 240
  241 VPLDDQVILL RAGWNELLIA AFSHRSISVK DEILLATGLH VPKESTHNLG VEAFFDRESS 300
  301 HSAEVGALFD RVLTELVCKM RDMQMDKTEL GCLRAIVLFN PDAKGLTSSS EVELLREKVY 360
  361 ASLESYCKQK YPDQQGRFAK LLLRLPALRS IGLKCLEHLF FFKLIGNTPI DTFLMEMLES 420
  421 PH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle