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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190150718, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFYREEDYG LYALTILAQY HNIAVNPEEL KHKFDLEGKG LDLTAWLLAA KSLELKAKQV  60
   61 KKAIDRLAFI ALPALVWRED GKHFILTKID NEAKKYLIFD LETHNPRILE QAEFESLYQG 120
  121 KLILVASRAS IVGKLAKFDF TWFIPAVIKY RKIFIETLIV SIFLQIFALI TPLFFQVVMD 180
  181 KVLVHRGFST LNVITVALAI VVLFEIVLNG LRTYIFAHST SRIDVELGAR LFRHLLALPI 240
  241 SYFENRRVGD TVARVRELDQ IRNFLTGQAL TSVLDLMFSF IFFAVMWYYS PKLTLVILGS 300
  301 LPFYMGWSIF ISPILRRRLD EKFARGADNQ SFLVESVTAI NTIKALAVTP QMTNTWDKQL 360
  361 ASYVSAGFRV TTLATIGQQG VQFIQKVVMV ITLWLGAHLV ISGDLSIGQL IAFNMLSGQV 420
  421 IAPVIRLAQL WQDFQQVGIS VTRLGDVLNS PTESYQGKLA LPEIKGDITF RNIRFRYKPD 480
  481 APVILNDVNL SIQQGEVIGI VGRSGSGKST LTKLIQRFYI PENGQVLIDG HDLALADPNW 540
  541 LRRQVGVVLQ DNVLLNRSIR DNIALADPGM PMEKIVHAAK LAGAHEFISE LREGYNTIVG 600
  601 EQGAGLSGGQ RQRIAIARAL VNNPKILIFD EATSALDYES EHIIMRNMHQ ICKGRTVIII 660
  661 AHRLSTVKNA DRIIVMEKGQ IVEQGKHKEL LADPNGLYHY LHQLQSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle