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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RRBP1_CANLF
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIYDTQTLG VMVFGGFMVV SAIGIFLVST FSMKETSYEE ALANQRKEMA KTHHQKVEKK  60
   61 KKEKTVEKKG KTKKKEEKPN GKIPDHEPAP NVTILLKDPV RAPAVPVAPT PVQPPVVIAP 120
  121 VATVPAMPQE KLAPSPKDKK KKEKKVAKVE PAVSSVVNSV QVLASKAAIL ETAPKEVPMV 180
  181 VVPPVGAKAG TPATSTAQGK KAEGAQNQSR KAEGAPNQGK KAEGALNQGK KAEGAQNQGK 240
  241 KVEVAPNQGK KAEGGQNQGK KVEGAQNQGK KAEGTPNQGK KAEGAPNQGK KTDGAPNQGK 300
  301 KSEGAPNQGK KAEGAQNQGK KVEVAPNQGK KAEGGQNQGK KVEGAQNQGK KAEGTPNQGK 360
  361 KAEGAPNQGK KTDGAPNQGK KSEGAPNQGK KVEGAQNQGK KVEGVQNQGK KAEGAQNQGK 420
  421 KAEGTSSQGR KEEGTPNLGK KAEGSPNQGK KVEVVQNQSK KVEGAPNQGK KAEGSQNQGK 480
  481 KTEGASNQGK KVDGAQNQGK KAEGAPNQGK KVEGAQNQGK KAEGTPNQGK KAEGAQNQGK 540
  541 KAEGAPNQGK KAEGAPNQGK KAEGAPNQGK KAEGAPNQGK KAEAAPNQGK KAEGAPNQGK 600
  601 KAEGAPNQGK KAEAAPNQGK KAEGAPNQGK KAEGAPNQGK KAEGAPNQGK KAEGAQNQGK 660
  661 KAEGAPNQGK KADLVANQGT KAEGVAGQGK KAEGAPNQGK KGEGTPNQGK KSEGSPNQGK 720
  721 KVDASANQSK RAESAPIQGK NADMVQSQEA PKQEAPAKKK SGSKKKGEPG PPDSDSPLYL 780
  781 PYKTLVSTVG SMVFNEGEAQ RLIEILSEKA GVIQDTWHKA TQKGDPVAIL KRQLEEKEKL 840
  841 LATEQEDAAV AKSKLREVNK ELAAEKAKAA AGEAKVKKQL VAREQEITAV QARIEASYRE 900
  901 HVKEVQQLQG KIRTLQEQLE NGPNTQLARL QQENSILRDA LNQATSQVES KQNTELAKLR 960
  961 QELSKVSKEL VEKSEAARQE EQQRKALETK TAALEKQVLQ LQASHKESEE ALQKRLDEVS1020
 1021 RELCRSQTSH ASLRADAEKA QEQQQQMAEL HSKLQSSEAE VKSKSEELSG LHGQLKEARA1080
 1081 ENSQLMERIR SIEALLEAGQ ARDTQDAQAS RAEHQARLKE LESQVWCLEK EATELKEAVE1140
 1141 QQKVKNNDLR EKNWKAMEAL ASAERACEEK LRSLTQAKEE SEKQLSLTEA QTKEALLALL1200
 1201 PALSSSAPQS YTEWLQELRE KGPELLKQRP ADTDPSSDLA SKLREAEETQ NNLQAECDQY1260
 1261 RTILAETEGM LKDLQKSVEE EEQVWKAKVS ATEEELQKSR VTVKHLEDIV EKLKGELESS1320
 1321 EQVREHTSHL EAELEKHMAA ASAECQSYAK EVAGLRQLLL ESQSQLDAAK SEAQKQSNEL1380
 1381 ALVRQQLSEM KSHVEDGDVA GSPAAPPAEQ DPVELKAQLE RTEATLEDEQ ALRRKLTAEF1440
 1441 QEAQSSACRL QAELEKLRST GPLESSAAEE ATQLKERLEK EKKLTSDLGH AATKLQELLK1500
 1501 TTQEQLAKER DTVKKLQEQL DKTDDSSSKE GTSV

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