YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RR4_OENHO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRYRGPRFK KIRRLGALPG LTSKRPRAGS DPSRQGLSGN KSQYRIRLEE KQKLRFHYGL  60
   61 TERQLLKYVR IAGKAKGPTG QVLLQLLEMR LDNILFRLGM ASTIPQARQL VNHRHILVNG 120
  121 RIVDIPSYRC KPRDIITAKD DQKSKAMIQN SLESPPHEEV PKHLTFHPFQ YKGLVNQIID 180
  181 SEWVGLKINE LLVVEYYSRQ TKT

Type	Start	End	Confidence
Signal Peptide	1	30	0.66
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	203	0.99