YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RR4_LOTJA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRYRGPRFK KIRRLGALPG LTSKRPTVGS ELRNQSRSTK KSQYRIRLEE KQKLRFHYGL  60
   61 TERQLLKYVR IAGKAKGSTG QVLLQLLEMR LDNILFRLGM ASTIPQARQL VNHRHVFVNG 120
  121 HIVDIPSYRC KPQDIITAKD NKKSKTLIQN SLESAPREEL PTHLTLQPFQ YKGLVNQIID 180
  181 SKWVGLKINE LLVVEYYSRQ T

Type	Start	End	Confidence
Signal Peptide	1	29	0.76
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	201	0.99