YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RR4_IRIPA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRYRGPRFK KIRRLGALPG LTSKRPRSGS DPKNQLRSGK RSQYRIRLEE KQKLRFHYGL  60
   61 TERQLLKYVH IAGKAKGSTG QVLLQLLEMR LDNILFRLGM ASTIPGARQL VNHRHILVNG 120
  121 RIVDIPSYRC KPRDIITTKD KQRSKALIQN YIASSPHEEL PNHLTIDPFQ YKGLVNQIID 180
  181 SKWIGLKINE LLVVEY

Type	Start	End	Confidence
Signal Peptide	1	29	0.53
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	196	0.99