YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|311087916\|gb\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFFLAPSI LSADFARLGE DIKKVIDAGS DLIHFDVMDN HYVPNLSMGP MILESLRNYN  60
   61 ITAPIDVHLM VKPVDNLIPQ FAKAGATFIT FHPEATLHIE RTLNLIKENG CKAGLAFNPA 120
  121 TPLNFLDYIL EKLDLILLMS VNPGFGNQSF LPSTFNKLRE VRKIIDANFS DILLEVDGGV 180
  181 KLDNIADIAC AGANVFVMGS GLFKYSNYKL VIEKIRKKLE YAHSRSIH

Type	Start	End	Confidence
Signal Peptide	1	16	0.75
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	228	0.99