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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ROC4_NICSY
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCATKPIIK PSSMATNSCL ISLPPLFATT TKSKSFAYPY LSNTLKPIKL LHLSCTYSPC  60
   61 ILSPKKKTSV SALQEEENTL ILDGQGQESG DLFNFEPSGE ETEEEGFVEA VGDAGESDEV 120
  121 EADEEEEEFQ EPPEDAKLFV GNLPYDVDSE GLARLFEQAG VVEIAEVIYN RDTDQSRGFG 180
  181 FVTMSTVEEA EKAVEMYNRY DVNGRLLTVN KAARRGERPE RPPRTFEQSY RIYVGNIPWG 240
  241 IDDARLEQLF SEHGKVVSAR VVYDRETGRS RGFGFVTMAS EAEMSDAIAN LDGQSLDGRT 300
  301 IRVNVAEDRS RRNTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle