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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RNZ2_MACFA
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWALCSLLRS ATGRTMSQGR TISQGSARRQ RPPKDPLRHL RTREKRGPSG SSGGANTVYL  60
   61 QVVAVGSRDA GAALYVFSEF NRYLFNCGEG VQRLMQEHKL KVARLDNIFL TRMHWSNVGG 120
  121 LSGMILTLKE TGLPKCVLSG PPQLEKYLEA IKIFSGPLKG IELAVRPHSA PEYKDETMTV 180
  181 YQIPIHSEQR SGKHQPWQSP ERPLGRLSPE RSSDSESNES EPHLPRGVSQ RRGVRDPSLV 240
  241 VAFICKLHLK RGSFLVLKAK ELGLPVGTAA IAPIIAAVKD GKSITHEGRE ILAEELCTPP 300
  301 DPGAAFVVVE CPDEGFIQPI CENATFQRYQ GKADAPVALV VHMAPESVLA DSRYQQWMER 360
  361 FGPDTQHLVL NENCASVHNL RSYKIQTQLN LIHPDIFPLL TSFPRKKEGP TLSVPVVQGE 420
  421 CLLKYQLRPR REWQRDAIIT CNPEEFIDEA LQLPNFQESM QEYRRSAQDG PAPAEKRSQY 480
  481 PEIVFLGTGS AVPMKTRNVS ATLVNISPDT SLLLDCGEGT FGQLYRHYGD QVDRVLGSLA 540
  541 AVFVSHLHAD HHTGLLNILL QRERALASLG KPFHPLLVVA PTQLKAWLQQ YHNQCQEVLH 600
  601 HVSMIPAKYL QVGAEISSPA VERLISSLLR TCDLEEFQTC LVRHCRHAFG CALVHTSGWK 660
  661 VVYSGDTMPC EALVQMGKDA TLLIHEATLE DGLEEEAVEK THSTTSQAIR VGMRMNAEFI 720
  721 MLNHFSQRYA KVPLFSPDFN EKVGIAFDHM KVSFGDFPTV PKLIPPLKAL FAGDIEEMEE 780
  781 RREKRELRQV RAALLSRALT DDLEDGEPQQ KRAHTEEPQS KKVRAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle