YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK13_SPIOL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATMACASSL TFPSAQTQKS FFGTNVKQTP VLSFPRPTVA AAVAVSARKS TSASTKCTEE  60
   61 WRQLKEAVKK EFAIPHVPLD QRWMFTLEEA TGPDIWNTTW YPKSADHVPT DKKWYVVDAT 120
  121 DLILGRMAST IAIHIRGKNL ASYTPSVDMG AFVIVVNADK VAVSGKKRTQ KLYRRHSGRP 180
  181 GGLKEETFDQ LQKRIPERII EHAVRGMLPK GRLGRYLFNH LKVYKGAEHP HQAQQPIDLP 240
  241 LRDKRIRVEK

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	250	0.99