YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RIR2_DICDI
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEINKKDTF IEPILKENKD RFVLFPIKYP DIWRMYKKAL ASHWVAEEID LGNDNVDWEY  60
   61 KLTDNERHFI SHVLAFFAAS DGIVNENLAT RFMSEVQIPE ARCFYGFQIA IENIHSETYS 120
  121 LLIETYIKDK QTKDKLFNAI ETIPCIKKKA EWALRWINDS DSFAERLVAF AAVEGIFFSG 180
  181 SFCSIFWLKK RGLMQGLTFS NELISRDEGL HCDFACLLYT KLQRKLDPKV IEKMIRDAVE 240
  241 CEKEFICESL PVDLIGMNSR SMSQYIEFCA DRLVVSLGYK KIFNSSNPFE WMEMISLQRK 300
  301 SNFFEGKVAE YAKTGVAIQG NNQQKNNQSR TLVLDEDF

Type	Start	End	Confidence
Non-Cytoplasmic	1	166	0.84
Transmembrane Helix	167	188	0.61
Cytoplasmic	189	338	0.52