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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RPN1_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.74
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPVALLLL LLLCLGALAP TPGSASSEAP PLVNEDVKRT VDLSSHLAKV TAEVVLVHPG  60
   61 GGSTSRASSF VLALEPELES RLAHLGVQIK GEDEEDNNLE VRETKIKGKS GRFFTVKLPV 120
  121 ALDPGSKISV VVETVYTHVL HPYPTQITQS EKQFVVFEGN HYFYSPYPTK TQTMRVKLAS 180
  181 RNVESYTKLG NPSRSEDVLD YGPFKDIPAY SQDTFKVHYE NNSPFLTITS MTRVIEVSHW 240
  241 GNIAVEENVD LKHTGAVLKG PFSRYDYQRQ PDSGISSIRS FKTILPAAAQ DVYYRDEIGN 300
  301 VSTSHLLILD DSVEMEIRPR FPLFGGWKTH YIVGYNLPSY EYLYNLGDQY ALKMRFVDHV 360
  361 FDEQVIDSLT VKIILPEGAK NIQVDSPYDI SRAPDELHYT YLDTFGRPVI VAYKKNLVEQ 420
  421 HIQDIVVHYT FNKVLMLQEP LLVVAAFYIL FFTVIIYVRL DFSITKDPAA EARMKVACIT 480
  481 EQVLTLVNKR LGLYRHFDET VNRYKQSRDI STLNSGKKSL ETEHKAVTSE IAVLQSRLKT 540
  541 EGSDLCDRVS EMQKLDAQVK ELVLKSAVEA ERLVAGKLKK DTYLENEKLS SGKRQELVTK 600
  601 IDHILDAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle