YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PYRE_YARLI
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAYKKDFLD LATKYEALKF GSFTLKSGRT SPYFFNLGLF NTGVALSTVG ASFAQVIINS  60
   61 GVEFDVIFGP AYKGIPLAAV TAAKIAELGG EKYATKEYAF NRKEAKDHGE GGNIVGASLK 120
  121 GKKVLIIDDV ITAGTAIKEA FSIIDANGAT VSAVVIALDR QETTVDSPKS AVQVVSQTYN 180
  181 VPVLNIFNLN DVIQYTDGIL TEDEKKKIEQ YRDQYSPKE

Type	Start	End	Confidence
Cytoplasmic	1	32	0.68
Transmembrane Helix	33	54	0.66
Non-Cytoplasmic	55	219	0.83