YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148269614, gi...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVGIIMGS DSDLPVMKQA AEILEEFGID YEITIVSAHR TPDRMFEYAK NAEERGIEVI  60
   61 IAGAGGAAHL PGMVASITHL PVIGVPVKTS TLNGLDSLFS IVQMPGGVPV ATVAINNAKN 120
  121 AGILAASILG IKYPEIARKV KEYKERMKRE VLEKAQRLEQ IGYKEYLNQK E

Type	Start	End	Confidence
Cytoplasmic	1	58	0.52
Transmembrane Helix	59	77	0.49
Non-Cytoplasmic	78	171	0.66