YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PURE_AQUAE
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLVGVIMG SISDWEYMKK AVEVLKEFGV PHEVKVVSAH RTPELMYEYA KTARERGIEV  60
   61 IIAGAGGSAH LPGMTASMTT LPVIGVPIPT KNLGGVDSLY SIVQMPAGIP VATVAIGNAT 120
  121 NAGLLAVRIL SIKYPEYAKK LDEYTEKLKE KVAKMNEELQ KEVENGI

Type	Start	End	Confidence
Cytoplasmic	1	59	0.89
Transmembrane Helix	60	84	0.74
Non-Cytoplasmic	85	106	0.86
Transmembrane Helix	107	130	0.77
Cytoplasmic	131	167	0.89