YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PTPN_MOUSE, PTPR...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRPRRPGGS GGSGGSGGLR LLVCLLLLSG RPGGCSAISA HGCLFDRRLC SHLEVCIQDG  60
   61 LFGQCQAGVG QARPLLQVTS PVLQRLQGVL RQLMSQGLSW HDDLTQHVIS QEMERIPRLR 120
  121 PPEPHPRDRS GLVPRKPGPA GELLTQGNPT GSSPAAQGFP RPAGGRSWGG SPLSSLQAEL 180
  181 LPPLLEHLLM PPQPPHPALT YEPALLQPYL FHQFGSRDGS RGSESSSGVV GVGHLSKAEG 240
  241 PALFSRSASK AILGTHSGHS FGDLTGPSPA QLFQDSGLLY MAQELPVPGR ARAPRLPENG 300
  301 GNRAEDSSEG HEEEVLGGRG EKSPPQAAQP ELSLQRLTAV LAGYGVELRQ LTPEQFSTLL 360
  361 TLMQLLPKGT GRNLEGAVNV GGADVKKTIQ QMQRGDPAEA LPPTPSLPGY LTASPASSEV 420
  421 QQVLSPGFPE PPHTPSPLGS SSVLLEKKSP LGQSQPTVVG RPSARPSAEE YGYIVTDQKP 480
  481 LSLVAGVRLL EILAEHVHMS SGSFINISVV GPAVTFRIRH NEQNLSLADV TQQAGLVKSE 540
  541 LEAQTGLQIL QTGVGQREEA AEVLPRQAHG ISPMRSVLLT LVALAGVAGL LVALAVALCM 600
  601 RHHSRQRDKE RLAALGPEGA HGDTTFEYQD LCRQHMATKS LFNRAEGQPE PSRVSSVSSQ 660
  661 FSDAAQASPS SHSSSPSWCE EPAQANMDIS TGHMILAYME DHLRNRDRLA KEWQALCAYQ 720
  721 AEPNTCAAAQ DESNIKKNRH PDFLPYDHAR IKLKVESSPS RSDYINASPI IEHDPRMPAY 780
  781 IATQGPLSHT IADFWQMVWE SGCTVIVMLT PLVEDGVKQC DRYWPDEGSS LYHVYEVNLV 840
  841 SEHIWCEDFL VRSFYLKNLQ TQETRTLTQF HFLSWPAEGT PASTRPLLDF RRKVNKCYRG 900
  901 RSCPIIVHCS DGAGRTGTYI LIDMVLNRMA KGVKEIDIAA TLEHVRDQRP GLVRSKDQFE 960
  961 FALTAVAEEV NAILKALPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle