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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PT494_SACBA
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLKKGKRSI GTVWRLLWKR LYSVHYKTNT YSTRSRKKLV TNFTRVNGLL LSCNGDTFPY  60
   61 MRTLWRYFNA PGNLMFVTTN IITFTGIVAY NTMVTVSNER VFEEQMIAAQ MSLAKQKEEL 120
  121 ETRALDFPAN HEQIKEADDA NCEQPAIERS GEDRSVKQQN EQLDSPIRHY SLTDLVLNKE 180
  181 ARVADYDSQR VKASLFHMLY AYMLYRDTIQ PNSDSPNHNS EEWRHEVELL TRDKWLQGAH 240
  241 QRIDVFYDLW NNQLDKIVTS PEKVQNFHLP NWSKYPTLLK FICTELHNNE LTTLDEFKQF 300
  301 YGKVRSNEVK KLLGLWLYDH SFLFPRNIYD NKNQEVFYDT LISDSMQDNK IFQKYSSIVM 360
  361 NPDNERTQLF FPNIYAQPVN KPIPSISLET YTRLLRGYIT LQETNCKYDY NDNIFKLISI 420
  421 LKMNCFLQHD KKIRTGASVR ILLPRDEDRS PVLNTIPQAE KKTCYQILSK NRDILALLKR 480
  481 ISDIQIDSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle