YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|967968
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVMLSSV TLKPAGFTVE KMSARGLPSL TRASPSSFRI VASGVKKIKT DKPFGVNGSM  60
   61 DLRDGVDASG RKGKGYGVYK FVDKYGANVD GYSPIYNEDE WSASGDVYKG GVTGLAIWAV 120
  121 TLAGILAGGA LLVYNTSALA Q

Type	Start	End	Confidence
Cytoplasmic	1	110	0.84
Transmembrane Helix	111	134	0.85
Non-Cytoplasmic	135	141	0.74