YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSBQ_SPIOL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQAMASMAG LRGASQAVLE GSLQISGSNR LSGPTTSRVA VPKMGLNIRA QQVSAEAETS  60
   61 RRAMLGFVAA GLASGSFVKA VLAEARPIVV GPPPPLSGGL PGTENSDQAR DGTLPYTKDR 120
  121 FYLQPLPPTE AAQRAKVSAS EILNVKQFID RKAWPSLQND LRLRASYLRY DLKTVISAKP 180
  181 KDEKKSLQEL TSKLFSSIDN LDHAAKIKSP TEAEKYYGQT VSNINEVLAK LG

Type	Start	End	Confidence
Signal Peptide	1	17	0.79
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	232	0.97