YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSBP_CUCSA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSCFLHH HALTAAARSS SSPRQAALPK SPQLLVCRAQ KQQPAQEEEG GVVSRRLALT  60
   61 VLIGAAALGS KVSPADAAYG EAANVFGKPK SNTDYLPYSG DGFKLSIPSK WNPSKEREFP 120
  121 GQVLRYEDNF DSNSNLSVII NPTDKKSIKD FGSPEEFLSK VDYLLGKQAY FGKTASEGGF 180
  181 DPDAVATANI LEATASNVNG KDYYFVSVLT RTADGDEGGK HQLITATVND GKLYICKAQA 240
  241 GDKRWFKGAR KFVEGAASSF SVA

Type	Start	End	Confidence
Signal Peptide	1	26	0.79
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	263	0.99