YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRL_RABIT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKWSRRTG SLLLLLVSNL LLCKSTASLP ICPSGAVNCQ VSLRDLFDRA VILSHHIHKL  60
   61 SSEMFNEFDK RYTQGRGFIT KAINSCHTSS LSTPEDKEQA QQIHHEDLLN MVLRVLPSWN 120
  121 DPLYHLVTEV RGMQEAPDAI LSKAIEIEEQ NRRLLEGMEK IVGQVHPGIK ENEIYSVWSG 180
  181 LPSLQMADED ARLFAFYNLL HCLRRDSHKI DNYLKLLKCR IIYDSNC

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	227	0.99