YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRL_FELCA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNKGWSLKG SLLFLLLLLS DLLLCKSVAS LPICPSGAVN CQVSLRDLFD RAVILSHYIH  60
   61 NLSSEMFNEF DKRYAQGRGF ITKAINSCHT SSLPTPEDKE QAQQIHHEDL LNVILRVLRS 120
  121 WNDPLYHLVT EVRGLHEAPD AILSRAIEIE EQNRRLLEGM EKIVHQVHPG VRENEVYSVW 180
  181 SGLPSLQMAD EDSRLFAFYN LLHCLRRDSH KIDSYLKLLK CRIVYDSNC

Type	Start	End	Confidence
Signal Peptide	1	29	0.97
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	229	0.99