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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRLR_RABIT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.59
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKENVASMIV FLLLLFLNIR LLKGQSPPGK PFIFKCRSPE KETFTCWWRP GADGGLPTNY  60
   61 TLTYHKEGET ITHECPDYKT GGPNSCYFSK KHTSIWTIYI ITVNATNQMG SSVSDPRYVD 120
  121 VTYIVEPDPP VNLTLEVKHP EDRKPYLWVK WLPPTLVDVR SGWLTLQYEI RLKPEKAAEW 180
  181 ETHFAGQQTQ FKILSLYPGQ KYLVQVRCKP DHGFWSVWSP ESSIQIPNDF TMKDITVWIF 240
  241 VAVLSTIICL IMVWAVALKG YSMVTCIFPP VPGPKIKGFD THLLEKGKSE ELLSAFGCQD 300
  301 FPPTADCEDL LVEFLEVDDS EDQQLMPAHS KEHSGPGMKP TDLDPDNDSG RGSCDSPSLL 360
  361 SEKCEEPQAN PSTFHTPEVI EQPEKPKANV THTWDPQTIS LVGKMPYLSV NGSKSSTWPL 420
  421 LQPGQHNTNS PYHNIADMCK LATSLDKIDK DALQSSKTTE AAGEEKATKQ REVESSHSKA 480
  481 EQDTGWLLPK EKPPFISPKP LDYVEIHKVN KDGALSLLLK QKENGDQTGK AGTPETSKEY 540
  541 AKVSRVMDNN ILVLVQDPGA QNVALFEEST KEAPPSPSQN QAEKDLSSFS TAPSDCRLQQ 600
  601 GGLDYLDPAC FMHSLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle