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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRLR_BOVIN
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKENAASRVV FILLLFLSVS LLNGQSPPEK PKLVKCRSPG KETFTCWWEP GADGGLPTNY  60
   61 TLTYHKEGET LIHECPDYKT GGPNSCYFSK KHTSIWKMYV ITVNAINQMG ISSSDPLYVH 120
  121 VTYIVEPEPP ANLTLELKHP EDRKPYLWIK WSPPTMTDVK SGWFIIQYEI RLKPEKATDW 180
  181 ETHFTLKQTQ LKIFNLYPGQ KYLVQIRCKP DHGYWSEWSP ESSIQIPNDF PVKDTSMWIF 240
  241 VAILSAVICL IMVWAVALKG YSMVTCILPP VPGPKIKGFD VHLLEKGKSE ELLRALESQD 300
  301 FPPTSDCEDL LMEFIEVDDC EDQQLMPRPS KEHTEQGVKP MHLDLDSDSG RGSCDSPSLL 360
  361 SEKCDEPQAH PSKFHTPEGP EKLENPETNL TCLQAPQSTS VEGKIPYFLA NGPKSSTWPF 420
  421 PQPPSLYSPR YSYHNIADVC ELALGMAGTT ATSLDQTDQH ALKASKTIET GREGKATKQR 480
  481 ESEGCSSKPD QDTVWPRPQD KTPLISAKPL EYVEIHKVSQ DGVLALFPKQ NEKFGAPEAS 540
  541 KEYSKVSRVT DSNILVLVPD PQAQNLTLLE EPAKKAPPAL P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle