YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRA1_CANAL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLLFCLFF AFSVAAPVTV TRFVNASPTG YDWRADWVKG FPIDSSCNAT QYNQLSTGLQ  60
   61 EAQLLAEHAR DHTLRFGSKS PFFRKYFGND TASAEVVGHF ENVVGADKSS ILFLCDDLDD 120
  121 KCKNDGWAGY WRGSNHSDQT IICDLSFVTR RYLSQLCSGG YTVSKSKTNI FWAGDLLHRF 180
  181 WHLKSIGQLV IEHYADTYEE VLELAQENST YAVRNSNSLI YYALDVYAYD VTIPGEGCNG 240
  241 DGTSYKKSDF SSFEDSDSGS DSGASSTASS SHQHTDSNPS ATTDANSHCH THADGEVHC

Type	Start	End	Confidence
Signal Peptide	1	26	0.89
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	299	0.99