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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PO2F1_PIG
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNPSETSKP SMESGDSNTG TQTNGLDFQK QPVPVGGAIS TAQAQAFLGH LHQVQLAGTS  60
   61 LQAAAQSLNV QSKSNEESGD SQQPSQPSQQ PSVQAAIPQT QLMLAGGQIT GLTLTPAQQQ 120
  121 LLLQQAQAQA QLLAAAVQQH SASQQHSAAG ATISASAATP MTQIPLSQPI QIAQDLQQLQ 180
  181 QLQQQNLNLQ QFVLGHPTTN LQPAQFIISQ TPQGQQGLLQ AQNLLTQLPQ QSQANLLQSQ 240
  241 PSITLTSQPA TPTRTIAATP IQTLPQSQST PKRIDTPSLE EPSDLEELEQ FAKTFKQRRI 300
  301 KLGFTQGDVG LAMGKLYGND FSQTTISRFE ALNLSFKNMC KLKPLLEKWL NDAENLSSDS 360
  361 ALCSPSALNS PGLGVEGLNR RRKKRTSIET NIRVALEKSF LENQKPTSEE ITMIADQLNM 420
  421 EKEVIRVWFC NRRQKEKRIN PPSSGGTSSS PIKAIFPSPT SLVGTTPSLV TSSAATTLTV 480
  481 NPVLPLTSAA VTNLSVTGTT DTTSNNTATV ISTAPPASSA VTSPSLSPSP SASGSTSEVS 540
  541 SASETSTTQT TSTPLSSPLG TSQVMVTASG LQTAAAAALQ GAAQLPANAS LAAMAAAAGL 600
  601 NPGLMAPSQF AAGGALLSLN PGTLGGALSP ALMSNSTLAT IQALASGGSL PITSLDATGN 660
  661 LVFGNAGGAP NIVTAPLFLN PQNLSLLTSN PVSLVSAAAA SAGNSGPVAS LHATSTSAES 720
  721 IQNSLFTVAS ASGAASTTTT ASKAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle