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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PMEU1_SOLLC
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVEDFFSK QIDFCKRKKK IYLAIVASVL LVAAVIGVVA GVKSHSKNSD DHADIMAISS  60
   61 SAHAIVKSAC SNTLHPELCY SAIVNVSDFS KKVTSQKDVI ELSLNITVKA VRRNYYAVKE 120
  121 LIKTRKGLTP REKVALHDCL ETMDETLDEL HTAVEDLELY PNKKSLKEHV EDLKTLISSA 180
  181 ITNQETCLDG FSHDEADKKV RKVLLKGQKH VEKMCSNALA MICNMTDTDI ANEMKLSAPA 240
  241 NNRKLVEDNG EWPEWLSAGD RRLLQSSTVT PDVVVAADGS GDYKTVSEAV RKAPEKSSKR 300
  301 YVIRIKAGVY RENVDVPKKK TNIMFMGDGK SNTIITASRN VQDGSTTFHS ATVVRVAGKV 360
  361 LARDITFQNT AGASKHQAVA LCVGSDLSAF YRCDMLAYQD TLYVHSNRQF FVQCLVAGTV 420
  421 DFIFGNGAAV FQDCDIHARR PGSGQKNMVT AQGRTDPNQN TGIVIQKCRI GATSDLRPVQ 480
  481 KSFPTYLGRP WKEYSRTVIM QSSITDVIQP AGWHEWNGNF ALDTLFYGEY ANTGAGAPTS 540
  541 GRVKWKGHKV ITSSTEAQAY TPGRFIAGGS WLSSTGFPFS LGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle