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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLB2_CANAX
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVWQSILLF LVGCVLSKSP TNLYTPGYVQ CPEGKLTRSS LDGINSNEKA YIDRRYANAK  60
   61 SELSRFLHNA KMVDFDVDGF LNSNPTIGLA FSGGGYRAML AGAGELLALD SRATNPSVLS 120
  121 GILQSSSYIV GLSGGSWLVG SLASNDLIPV DQLLREDKLW DIQNSLVAYY GVNIVRNTAM 180
  181 WGNINLQVQT KQLAGFTVSI TDVYGRALSH QLLTNFDNQG ASFLWSDVTE TTSFQNNEMP 240
  241 YPILAALGRE PNTVLMNFNS TVFELTPYEV GSWDPSLRSF VDTKYIGTRL DDGAPVSKRC 300
  301 VNGFDNAGFF MGTSSSLFNI VLQQLNNMPI PPFLKELISK FTLDPVEKLN IDIAQYNPNP 360
  361 FHKSNNSDTK IAQSRTLYLA DGGEDGQNVP LLPLIHRKVS AIFAFDQSAD KNNWPDGSAL 420
  421 IKTFERQFSS QGDGIAFPYV PDQNTFRNTN LTSKPTFFGC DAQNLTSLTE NIYDVPVVIY 480
  481 LANRPFTYFS NISTFKLKYS DTERQGMISN GYDVASRLNG KLDNEWAACV GCAIIRREQE 540
  541 RLGIEQTEQC KKCFENYCWD GTIYKGEPLG DNFSDEGLTT SAAYYNSNNV AGINDGGIAL 600
  601 VKRDDLSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle