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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72160460, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEPLQPGDP GRIGPYRLVS RLGAGGMGQV FLARSPGGRP VVVKVILPEY ANDDEYRIRF  60
   61 AREVEAARRV GGFHTAQVID ADPTADPPWM ATAYIPGPSL RKAVTERGPL YGNNLRTLAA 120
  121 GLVEGLAAIH ACGLVHRDFK PSNIVLAADG PRVIDFGVAR PLDSSVMTQS GAVIGTLAYM 180
  181 SPEQTDGSQV GPASDVFSLG TVLAFAATGR SPFMADSIGE IIARISGPPP ELPELPDDLR 240
  241 ELVYACWEQN PDLRPTTAEL LAQLSTDHTG DDWPPPHLSD LIGSMLPLGA TTSPNPSLAI 300
  301 EPPPPSHGPP RPSEPLPDPG DDADEPSAEK PSRTLPEPEP PELEEKPIQV IHEPERPAPT 360
  361 PPRPREPARG AIKPKNPRPA APQPPWSPPR VQPPRWKQLI TKKPVAGILT AVATAGLVVS 420
  421 FLVWQWTLPE TPLRPDSSTA PSESADPHEL NEPRILTTDR EAVAVAFSPG GSLLAGGSGD 480
  481 KLIHVWDVAS GDELHTLEGH TDWVRAVAFS PDGALLASGS DDATVRLWDV AAAEERAVFE 540
  541 GHTHYVLDIA FSPDGSMVAS GSRDGTARLW NVATGTEHAV LKGHTDYVYA VAFSPDGSMV 600
  601 ASGSRDGTIR LWDVATGKER DVLQAPAENV VSLAFSPDGS MLVHGSDSTV HLWDVASGEA 660
  661 LHTFEGHTDW VRAVAFSPDG ALLASGSDDR TIRLWDVAAQ EEHTTLEGHT EPVHSVAFHP 720
  721 EGTTLASASE DGTIRIWPIA TE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle