YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PHF2_RHIME
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPAAVLSAA SGVALVLLSL ALLLTVLRII RGPTLPDRVL GLDMLVAIAI GLIAVIAVRT  60
   61 GFYLYIDIAI ALGLVGFLAT VAFARFILAR GLSPERRTPG TTEIPQAKPR PSQAGRRKRK 120
  121 GAR

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.88
Transmembrane Helix	7	29	0.91
Cytoplasmic	30	38	0.90
Transmembrane Helix	39	58	0.95
Non-Cytoplasmic	59	67	0.65
Transmembrane Helix	68	88	0.96
Cytoplasmic	89	123	0.98