YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGK2_METFE
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILVEGKVAG KKYREPFSKG VLARSLTRSG MDPTDAYLLA AEVESYLKKE KKKIVTIDEL  60
   61 VKIVYNKLKE KDEKIAEKYI RWRKIREYKE PLILLIAGAS GVGTSSIAFE VANRLGIRNM 120
  121 ISTDMIREVM RKMISKELIP SLHESTFTAY KSLRTPAPVE FDEVLVGFRD HVNVVTVGIE 180
  181 AVIERALTEG ISIVIEGAHL VPGFIREELI NKNNVAMFVL TVPDEKMHRS RFYSRCRQKW 240
  241 ARRPLERYLK YFWAIRRIHD YIEMQARKHN IPIIENIDVV TTIDSIVKSL TEDLVHKDVG 300
  301 KYKG

Type	Start	End	Confidence
Cytoplasmic	1	90	0.79
Transmembrane Helix	91	112	0.75
Non-Cytoplasmic	113	304	0.98