YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tr\|G3I8C0\|G3I8C0...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEHGAHITT ASVVDDQPSI FEVVAQDSLM TAVRPALQHV VKVLAESNPA HYGFFWRWFD  60
   61 EIFTLLDFLL QQHYLSRTSA SFSEHFYGLK RIVAGSSQQP QRPASAGLPK EHLWKSTMFL 120
  121 VLLPYLKVKL EKLASSLREE DEYSIHPPSS HWKRFYRAFL AAYPFVNMAW EGWFLTQQLR 180
  181 YILGKAEHHS PLLKLAGVRL GRLTAQDIQA IEHRLSEASV MQDPVRSVGE KIKLALKKAV 240
  241 GGIALSLSTG LSVGVFFLQF LDWWYSSENQ ETIKSLTALP TPPPPVHLDY NSDSPLLPKM 300
  301 KTVCPLCRKT RVNDTVLATS GYVFCYRCVF NYVRSHQACP ITGYPTEVQH LIKLYSPEN

Type	Start	End	Confidence
Cytoplasmic	1	238	0.72
Transmembrane Helix	239	261	0.73
Non-Cytoplasmic	262	359	0.90