YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEXA_PICAN, PEX1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKLLSFANA PAIVRANQKD SYFESRLHNQ LLDVVKAIKG SHFVHKYPEE LRTLATALYL  60
   61 CLTTLVGSKT LGEEYVDLVY VSRDGRKIPK FASRFGFVVA YVLFPYAVRQ LLQKLKAQQS 120
  121 RLAQLVSGVS YMNVMDLLNL HLALFYFTGK YYQFAKRLFG LRYAFGYRVD KNQQRARGNY 180
  181 ELLGLLIIFQ TVFKNVANLR KLWGATKTVQ DSGDLIYRFR DQTSDVIDLA DPKVLPYLPE 240
  241 ASRTCMLCLS PMKDPSCGEC GHVFCWKCVL DWVKERQECP LCRAKMRESQ LLPLR

Type	Start	End	Confidence
Signal Peptide	1	16	0.40
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	295	0.77